Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9311 and 9312 are separated by 705 nucleotides9312 and 9313 are separated by 4322 nucleotides9313 and 9314 are separated by 463 nucleotides9314 and 9315 are separated by 152 nucleotides mRNA_943: 9311 - K05759 PFN profilin, at 30,809 to 31,667 9311 mRNA_944: 9312 - Hypothetical Protein, at 32,373 to 33,071 9312 mRNA_945: 9313 - Hypothetical Protein, at 37,394 to 37,567 9313 mRNA_946: 9314 - Hypothetical Protein, at 38,031 to 38,831 9314 mRNA_947: 9315 - K00623 CHAT choline O-acetyltransferase, at 38,984 to 41,581 9315
Group Condition mRNA_943 mRNA_944 mRNA_945 mRNA_946 mRNA_947
9311 9312 9313 9314 9315
ypd buoyancy 40 hrs High Buoyancy N.D. -0.7 N.D. +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 N.D. -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 N.D. +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. +0.2 -0.3
growth on ypd YPD N.D. -0.3 N.D. +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. +0.2 -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.1 N.D. -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 N.D. +0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 N.D. +0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. +0.3 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.5 N.D. -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D. +0.2 +0.4
auxotrophy Dropout Complete N.D. -0.4 N.D. +0.3 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. +0.5 +0.1
growth on oleic acid YNB Glucose N.D. +0.7 N.D. +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. +0.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.7 +0.1
auxotrophy YNB Glucose N.D. +0.3 N.D. +0.1 +0.7
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