Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9313 and 9314 are separated by 463 nucleotides9314 and 9315 are separated by 152 nucleotides9315 and 9316 are separated by 119 nucleotides9316 and 9317 are separated by 442 nucleotides mRNA_945: 9313 - Hypothetical Protein, at 37,394 to 37,567 9313 mRNA_946: 9314 - Hypothetical Protein, at 38,031 to 38,831 9314 mRNA_947: 9315 - K00623 CHAT choline O-acetyltransferase, at 38,984 to 41,581 9315 mRNA_948: 9316 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 41,701 to 44,858 9316 mRNA_949: 9317 - KOG1268 Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains, at 45,301 to 46,716 9317
Group Condition mRNA_945 mRNA_946 mRNA_947 mRNA_948 mRNA_949
9313 9314 9315 9316 9317
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.3 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.4 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.5 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.4 -0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.0 -0.1 -0.0
growth on oleic acid YNB Glucose N.D. +0.1 +0.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.0 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.3 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 -0.2 -0.0 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.2 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 +0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -0.2 -0.1 -0.0
growth on ypd YPD N.D. +0.1 +0.0 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.0 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.3 +0.1 +0.4
auxotrophy YNB Glucose N.D. +0.1 +0.7 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.6 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.4 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.7 +0.1 -0.2 +0.1
auxotrophy Dropout Complete N.D. +0.3 +0.8 +0.0 +0.0
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