Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9315 and 9316 are separated by 119 nucleotides9316 and 9317 are separated by 442 nucleotides9317 and 9318 are separated by 202 nucleotides9318 and 9319 are separated by 93 nucleotides mRNA_947: 9315 - K00623 CHAT choline O-acetyltransferase, at 38,984 to 41,581 9315 mRNA_948: 9316 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 41,701 to 44,858 9316 mRNA_949: 9317 - KOG1268 Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains, at 45,301 to 46,716 9317 mRNA_950: 9318 - Hypothetical Protein, at 46,919 to 47,823 9318 mRNA_951: 9319 - K16261 YAT yeast amino acid transporter, at 47,917 to 50,163 9319
Group Condition mRNA_947 mRNA_948 mRNA_949 mRNA_950 mRNA_951
9315 9316 9317 9318 9319
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.2 -0.4 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.3 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 -0.2 +0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 +0.0 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.2 -0.1 +0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.0 +0.1 -0.1 -0.3
growth on oleic acid YNB Oleic Acid +0.0 -0.1 -0.0 -0.0 -0.1
auxotrophy YNB Glucose +0.7 -0.1 -0.3 -0.0 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.1 -0.2 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 -0.2 +0.3 -0.0
growth on oleic acid YNB Glucose +0.0 -0.1 -0.1 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 +0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 -0.1 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.0 -0.0 +0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -0.3 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.2 +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.1 +0.4 -0.0 -0.0
growth on ypd YPD +0.0 +0.0 +0.1 -0.2 +0.3
auxotrophy Dropout Complete +0.8 +0.0 +0.0 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 +0.1 +0.2 +0.2
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