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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9321 and 9322 are separated by 2131 nucleotides
9322 and 9323 are separated by 918 nucleotides
9323 and 9324 are separated by 297 nucleotides
9324 and 9325 are separated by 939 nucleotides
mRNA_953: 9321 - Hypothetical Protein, at 51,583 to 53,034
9321
mRNA_954: 9322 - K16261 YAT yeast amino acid transporter, at 55,166 to 57,720
9322
mRNA_955: 9323 - Hypothetical Protein, at 58,639 to 63,739
9323
mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64,037 to 66,119
9324
mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67,059 to 67,959
9325
Group
Condition
mRNA
_953
mRNA
_954
mRNA
_955
mRNA
_956
mRNA
_957
9321
9322
9323
9324
9325
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.1
-0.1
+0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.7
+0.1
-0.6
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
+0.0
-0.1
-0.1
auxotrophy
Dropout Complete
+0.1
-0.5
-0.0
-0.0
-0.2
growth on ypd
YPD
+0.4
-0.5
+0.1
+0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.7
-0.0
+0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.2
+0.2
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.5
-0.2
+0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
+0.4
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.1
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
+0.8
-0.5
-0.0
+0.2
-0.3
auxotrophy
YNB Glucose
+0.6
-0.3
-0.0
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.5
-0.1
+0.6
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.1
-0.0
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.4
+0.3
+0.1
+0.2
growth on oleic acid
YNB Glucose
+0.2
-0.1
+0.1
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.7
-0.4
-0.1
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.2
+0.5
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
-0.4
+0.0
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
-0.2
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.1
+0.3
+0.5
+0.6
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