Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9322 and 9323 are separated by 918 nucleotides9323 and 9324 are separated by 297 nucleotides9324 and 9325 are separated by 939 nucleotides9325 and 9326 are separated by 545 nucleotides mRNA_954: 9322 - K16261 YAT yeast amino acid transporter, at 55,166 to 57,720 9322 mRNA_955: 9323 - Hypothetical Protein, at 58,639 to 63,739 9323 mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64,037 to 66,119 9324 mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67,059 to 67,959 9325 mRNA_958: 9326 - K14541 DUR1 urea carboxylase / allophanate hydrolase, at 68,505 to 72,950 9326
Group Condition mRNA_954 mRNA_955 mRNA_956 mRNA_957 mRNA_958
9322 9323 9324 9325 9326
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.1 -0.6 -0.2 -0.2
auxotrophy Dropout Complete -0.5 -0.0 -0.0 -0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.5 -0.0 +0.2 -0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.0 +0.1 -0.0 +0.1
growth on ypd YPD -0.5 +0.1 +0.1 -0.3 +0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.0 -0.1 -0.1 +0.1
auxotrophy YNB Glucose -0.3 -0.0 +0.2 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 +0.6 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 +0.0 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 +0.4 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 +0.0 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 +0.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.5 -0.2 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.4 +0.2 -0.0 -0.0
growth on oleic acid YNB Glucose -0.1 +0.1 +0.0 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 +0.1 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.2 +0.1 -0.5 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.3 +0.1 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.2 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 +0.3 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.3 +0.5 +0.6 +0.0
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