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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9324 and 9325 are separated by 939 nucleotides
9325 and 9326 are separated by 545 nucleotides
9326 and 9327 are separated by 182 nucleotides
9327 and 9328 are separated by 618 nucleotides
mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64,037 to 66,119
9324
mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67,059 to 67,959
9325
mRNA_958: 9326 - K14541 DUR1 urea carboxylase / allophanate hydrolase, at 68,505 to 72,950
9326
mRNA_959: 9327 - Hypothetical Protein, at 73,133 to 74,885
9327
mRNA_960: 9328 - K20409 WDR59 WD repeat-containing protein 59, at 75,504 to 80,689
9328
Group
Condition
mRNA
_956
mRNA
_957
mRNA
_958
mRNA
_959
mRNA
_960
9324
9325
9326
9327
9328
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.0
+0.1
-0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.5
+0.4
-0.1
-0.2
auxotrophy
Dropout Complete
-0.0
-0.2
+0.1
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
-0.1
+0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.2
-0.2
+0.9
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.1
+0.3
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
-0.3
+0.0
+0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.0
+0.1
+0.2
-0.3
auxotrophy
YNB Glucose
+0.2
-0.3
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.0
+0.3
-0.2
growth on oleic acid
YNB Glucose
+0.0
+0.2
+0.0
+0.0
+0.0
growth on ypd
YPD
+0.1
-0.3
+0.0
+0.4
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.2
+0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.2
+0.0
-0.0
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.2
+0.1
+0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.1
+0.1
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.1
-0.0
-0.2
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.0
+0.1
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.2
+0.1
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.1
+0.0
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.6
+0.0
-0.4
+0.1
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