Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9333 and 9334 are separated by 582 nucleotides9334 and 9335 are separated by 1985 nucleotides9335 and 9336 are separated by 1846 nucleotides9336 and 9337 are separated by 2250 nucleotides mRNA_965: 9333 - Hypothetical Protein, at 90,078 to 91,448 9333 mRNA_966: 9334 - BLAST probable GUS1-Glutamyl-tRNA synthetase [Ustilago hordei], at 92,031 to 92,569 9334 mRNA_967: 9335 - HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452, at 94,555 to 95,203 9335 mRNA_968: 9336 - KOG0970 DNA polymerase alpha, catalytic subunit, at 97,050 to 97,673 9336 mRNA_969: 9337 - Hypothetical Protein, at 99,924 to 100,860 9337
Group Condition mRNA_965 mRNA_966 mRNA_967 mRNA_968 mRNA_969
9333 9334 9335 9336 9337
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.7 -1.3 -3.0 -1.6
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 -1.8 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 -0.3 +0.1 -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.2 +0.5 -0.2 -0.8
growth on ricinoleic acid YNB Glucose -0.0 -0.4 +0.4 +0.1 -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.2 +0.0 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 +0.1 +0.0 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.4 +0.4 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.5 +0.9 +0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.4 -0.1 -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 +0.2 +0.6 -0.5
auxotrophy Dropout Complete -0.1 -0.1 +1.0 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 +0.6 +0.2 -0.4
growth on ypd YPD +0.2 +0.0 +0.5 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.2 -0.7 +0.5 +0.2
auxotrophy YNB Glucose -0.1 -0.3 +1.1 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 +1.1 +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +1.2 +0.9 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.1 -0.5 +0.7 +0.7
growth on oleic acid YNB Glucose +0.3 -0.1 +0.5 +0.5 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 +1.5 +0.3 +0.4
remove
mRNA_965
plot
remove
mRNA_966
plot
remove
mRNA_967
remove
mRNA_968
plot
remove
mRNA_969
plot