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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9336 and 9337 are separated by 2250 nucleotides
9337 and 9338 are separated by 177 nucleotides
9338 and 9339 are separated by 2810 nucleotides
9339 and 9340 are separated by 427 nucleotides
mRNA_968: 9336 - KOG0970 DNA polymerase alpha, catalytic subunit, at 97,050 to 97,673
9336
mRNA_969: 9337 - Hypothetical Protein, at 99,924 to 100,860
9337
mRNA_970: 9338 - Hypothetical Protein, at 101,038 to 101,526
9338
mRNA_971: 9339 - KOG2262 Sexual differentiation process protein ISP4, at 104,337 to 107,412
9339
mRNA_972: 9340 - Hypothetical Protein, at 107,840 to 108,806
9340
Group
Condition
mRNA
_968
mRNA
_969
mRNA
_970
mRNA
_971
mRNA
_972
9336
9337
9338
9339
9340
ypd buoyancy
40 hrs No Buoyancy Separation
-3.0
-1.6
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-1.2
N.D.
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.8
N.D.
+0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.6
N.D.
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.7
N.D.
+0.1
+0.0
auxotrophy
Dropout Complete
-0.1
-0.2
N.D.
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.1
N.D.
+0.0
-0.1
growth on ypd
YPD
-0.1
+0.0
N.D.
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
N.D.
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.4
N.D.
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
N.D.
-0.1
+0.1
auxotrophy
YNB Glucose
+0.3
+0.0
N.D.
-0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.1
N.D.
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.1
N.D.
-0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.5
N.D.
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.4
N.D.
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
-0.2
N.D.
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.4
N.D.
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.2
N.D.
+0.0
+0.1
growth on oleic acid
YNB Glucose
+0.5
+0.6
N.D.
-0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.7
N.D.
+0.3
+0.3
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