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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9337 and 9338 are separated by 177 nucleotides
9338 and 9339 are separated by 2810 nucleotides
9339 and 9340 are separated by 427 nucleotides
9340 and 9341 are separated by 216 nucleotides
mRNA_969: 9337 - Hypothetical Protein, at 99,924 to 100,860
9337
mRNA_970: 9338 - Hypothetical Protein, at 101,038 to 101,526
9338
mRNA_971: 9339 - KOG2262 Sexual differentiation process protein ISP4, at 104,337 to 107,412
9339
mRNA_972: 9340 - Hypothetical Protein, at 107,840 to 108,806
9340
mRNA_973: 9341 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 109,023 to 112,852
9341
Group
Condition
mRNA
_969
mRNA
_970
mRNA
_971
mRNA
_972
mRNA
_973
9337
9338
9339
9340
9341
ypd buoyancy
40 hrs No Buoyancy Separation
-1.6
N.D.
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-1.2
N.D.
-0.0
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.6
N.D.
-0.2
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
N.D.
+0.0
-0.0
+0.0
growth on ricinoleic acid
YNB Glucose
-0.7
N.D.
+0.1
+0.0
-0.1
growth on ypd
YPD
+0.0
N.D.
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
N.D.
-0.1
+0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.0
-0.0
-0.3
auxotrophy
YNB Glucose
+0.0
N.D.
-0.2
+0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
N.D.
+0.3
-0.0
-0.0
auxotrophy
Dropout Complete
-0.2
N.D.
-0.1
+0.0
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
-0.2
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
+0.0
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
-0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
+0.2
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
N.D.
-0.1
+0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
+0.0
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
N.D.
-0.0
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
+0.0
+0.1
+0.1
growth on oleic acid
YNB Glucose
+0.6
N.D.
-0.0
-0.0
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
N.D.
+0.3
+0.3
+0.0
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