Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9339 and 9340 are separated by 427 nucleotides9340 and 9341 are separated by 216 nucleotides9341 and 9342 are separated by 513 nucleotides9342 and 9343 are separated by 598 nucleotides mRNA_971: 9339 - KOG2262 Sexual differentiation process protein ISP4, at 104,337 to 107,412 9339 mRNA_972: 9340 - Hypothetical Protein, at 107,840 to 108,806 9340 mRNA_973: 9341 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 109,023 to 112,852 9341 mRNA_974: 9342 - K03236 EIF1A translation initiation factor 1A, at 113,366 to 114,313 9342 mRNA_975: 9343 - Hypothetical Protein, at 114,912 to 116,236 9343
Group Condition mRNA_971 mRNA_972 mRNA_973 mRNA_974 mRNA_975
9339 9340 9341 9342 9343
growth on ypd YPD -0.1 -0.1 -0.3 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.0 +0.1 N.D. -0.4
auxotrophy YNB Glucose -0.2 +0.0 -0.2 N.D. -0.0
auxotrophy Dropout Complete -0.1 +0.0 +0.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 -0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 -0.3 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.0 -0.0 N.D. -0.5
growth on oleic acid YNB Glucose -0.0 -0.0 +0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.0 -0.3 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 +0.0 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.0 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.0 -0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.0 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 -0.2 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 +0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.1 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.3 +0.0 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.1 N.D. +0.4
remove
mRNA_971
plot
remove
mRNA_972
plot
remove
mRNA_973
remove
mRNA_974
plot
remove
mRNA_975
plot