Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9340 and 9341 are separated by 216 nucleotides9341 and 9342 are separated by 513 nucleotides9342 and 9343 are separated by 598 nucleotides9343 and 9344 are separated by 2032 nucleotides mRNA_972: 9340 - Hypothetical Protein, at 107,840 to 108,806 9340 mRNA_973: 9341 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 109,023 to 112,852 9341 mRNA_974: 9342 - K03236 EIF1A translation initiation factor 1A, at 113,366 to 114,313 9342 mRNA_975: 9343 - Hypothetical Protein, at 114,912 to 116,236 9343 mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118,269 to 121,735 9344
Group Condition mRNA_972 mRNA_973 mRNA_974 mRNA_975 mRNA_976
9340 9341 9342 9343 9344
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.0 N.D. -0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 N.D. +0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.0 +0.1 N.D. -0.4 -0.1
growth on ricinoleic acid YNB Glucose +0.0 -0.1 N.D. -0.2 -0.2
auxotrophy Dropout Complete +0.0 +0.0 N.D. -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 N.D. -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 N.D. +0.1 -0.3
auxotrophy YNB Glucose +0.0 -0.2 N.D. -0.0 -0.1
growth on ypd YPD -0.1 -0.3 N.D. -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 N.D. +0.0 -0.0
growth on oleic acid YNB Glucose -0.0 +0.0 N.D. -0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 N.D. +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 N.D. +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 N.D. -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.0 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. +0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 N.D. +0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 N.D. +0.4 -0.1
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