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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9340 and 9341 are separated by 216 nucleotides
9341 and 9342 are separated by 513 nucleotides
9342 and 9343 are separated by 598 nucleotides
9343 and 9344 are separated by 2032 nucleotides
mRNA_972: 9340 - Hypothetical Protein, at 107,840 to 108,806
9340
mRNA_973: 9341 - KOG4648 Uncharacterized conserved protein, contains LRR repeats, at 109,023 to 112,852
9341
mRNA_974: 9342 - K03236 EIF1A translation initiation factor 1A, at 113,366 to 114,313
9342
mRNA_975: 9343 - Hypothetical Protein, at 114,912 to 116,236
9343
mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118,269 to 121,735
9344
Group
Condition
mRNA
_972
mRNA
_973
mRNA
_974
mRNA
_975
mRNA
_976
9340
9341
9342
9343
9344
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.0
N.D.
-0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.3
N.D.
+0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
+0.1
N.D.
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
N.D.
-0.2
-0.2
auxotrophy
Dropout Complete
+0.0
+0.0
N.D.
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.2
N.D.
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.0
N.D.
+0.1
-0.3
auxotrophy
YNB Glucose
+0.0
-0.2
N.D.
-0.0
-0.1
growth on ypd
YPD
-0.1
-0.3
N.D.
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.3
N.D.
+0.0
-0.0
growth on oleic acid
YNB Glucose
-0.0
+0.0
N.D.
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
N.D.
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
N.D.
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.0
N.D.
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.2
N.D.
+0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.0
N.D.
+0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
N.D.
+0.4
-0.1
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