Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9344 and 9345 are separated by 362 nucleotides
9345 and 9346 are separated by 460 nucleotides
9346 and 9347 are separated by 314 nucleotides
9347 and 9348 are separated by 541 nucleotides
mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118,269 to 121,735
9344
mRNA_977: 9345 - KOG1378 Purple acid phosphatase, at 122,098 to 123,952
9345
mRNA_978: 9346 - Hypothetical Protein, at 124,413 to 124,580
9346
mRNA_979: 9347 - K03123 TFIIA2, GTF2A2, TOA2 transcription initiation factor TFIIA small subunit, at 124,895 to 125,472
9347
mRNA_980: 9348 - K03946 NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2, at 126,014 to 126,825
9348
Group
Condition
mRNA
_976
mRNA
_977
mRNA
_978
mRNA
_979
mRNA
_980
9344
9345
9346
9347
9348
auxotrophy
Dropout Complete
-0.1
+0.0
-1.4
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
-1.5
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
-1.0
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.4
-0.8
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.2
-1.3
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
-0.8
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
-0.8
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
-1.0
N.D.
N.D.
auxotrophy
YNB Glucose
-0.1
+0.0
-0.8
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
-0.2
+0.0
-0.6
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.0
-0.4
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.0
-0.3
-0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.0
-0.4
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
-0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
+0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
-0.0
N.D.
N.D.
growth on ypd
YPD
+0.2
+0.2
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.2
-0.0
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
+0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.0
+0.9
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.2
+1.1
N.D.
N.D.
remove
mRNA_976
plot
remove
mRNA_977
plot
remove
mRNA_978
remove
mRNA_979
plot
remove
mRNA_980
plot