Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9352 and 9353 are separated by 177 nucleotides
9353 and 9354 are separated by 749 nucleotides
9354 and 9355 are separated by 534 nucleotides
9355 and 9356 are separated by 153 nucleotides
mRNA_984: 9352 - Hypothetical Protein, at 132,612 to 133,421
9352
mRNA_985: 9353 - K14399 CLP1, HERB polyribonucleotide 5'-hydroxyl-kinase, at 133,599 to 135,746
9353
mRNA_986: 9354 - K03781 katE, CAT, catB, srpA catalase, at 136,496 to 139,711
9354
mRNA_987: 9355 - K04773 sppA protease IV, at 140,246 to 143,358
9355
mRNA_988: 9356 - BLAST glycerol-3-phosphate O-acyltransferase [Sanghuangporu..., at 143,512 to 144,351
9356
Group
Condition
mRNA
_984
mRNA
_985
mRNA
_986
mRNA
_987
mRNA
_988
9352
9353
9354
9355
9356
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
-0.4
+0.4
-4.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
N.D.
-0.0
+0.4
-4.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
-0.0
+0.0
-4.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
N.D.
-0.2
-0.2
-2.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
N.D.
+0.2
-0.4
-2.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
-0.0
-0.0
-2.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
+0.3
+0.1
-1.8
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
-0.0
+0.1
-1.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
+0.1
+0.0
-1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
N.D.
+0.2
+0.0
-1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.2
+0.2
-0.9
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
+0.2
-0.0
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.1
-0.2
+0.5
auxotrophy
YNB Glucose
+0.5
N.D.
+0.2
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.6
N.D.
-0.0
-0.0
+0.1
growth on oleic acid
YNB Glucose
+0.4
N.D.
+0.1
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
N.D.
+0.1
+0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.2
-0.0
+0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.0
+0.0
+1.1
auxotrophy
Dropout Complete
+0.3
N.D.
-0.1
+0.0
+1.1
growth on ypd
YPD
-0.0
N.D.
+0.2
-0.1
+2.6
remove
mRNA_984
plot
remove
mRNA_985
plot
remove
mRNA_986
remove
mRNA_987
plot
remove
mRNA_988
plot