Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9353 and 9354 are separated by 749 nucleotides9354 and 9355 are separated by 534 nucleotides9355 and 9356 are separated by 153 nucleotides9356 and 9357 are separated by 166 nucleotides mRNA_985: 9353 - K14399 CLP1, HERB polyribonucleotide 5'-hydroxyl-kinase, at 133,599 to 135,746 9353 mRNA_986: 9354 - K03781 katE, CAT, catB, srpA catalase, at 136,496 to 139,711 9354 mRNA_987: 9355 - K04773 sppA protease IV, at 140,246 to 143,358 9355 mRNA_988: 9356 - BLAST glycerol-3-phosphate O-acyltransferase [Sanghuangporu..., at 143,512 to 144,351 9356 mRNA_989: 9357 - Hypothetical Protein, at 144,518 to 146,452 9357
Group Condition mRNA_985 mRNA_986 mRNA_987 mRNA_988 mRNA_989
9353 9354 9355 9356 9357
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.4 -4.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.0 -4.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 +0.4 -4.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.2 -2.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.0 -2.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.4 -2.1 -0.0
growth on ricinoleic acid YNB Glucose N.D. -0.0 +0.1 -1.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.1 -1.8 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.0 -1.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.0 -1.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 -0.9 -0.1
auxotrophy YNB Glucose N.D. +0.2 -0.0 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 -0.0 +0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.2 -0.0 -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.0 -0.1 -0.1
growth on oleic acid YNB Glucose N.D. +0.1 +0.2 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.2 +0.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.0 +0.8 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.0 +1.1 -0.1
auxotrophy Dropout Complete N.D. -0.1 +0.0 +1.1 +0.3
growth on ypd YPD N.D. +0.2 -0.1 +2.6 -0.1
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