Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9358 and 9359 are separated by 419 nucleotides9359 and 9360 are separated by 378 nucleotides9360 and 9361 are separated by 1365 nucleotides9361 and 9362 are separated by 704 nucleotides mRNA_990: 9358 - Hypothetical Protein, at 146,849 to 147,409 9358 mRNA_991: 9359 - HMMPfam-Uncharacterised protein family, YAP/Alf4/glomulin-PF08568, at 147,829 to 149,137 9359 mRNA_992: 9360 - HMMPfam-OPT oligopeptide transporter protein-PF03169, at 149,516 to 150,268 9360 mRNA_993: 9361 - HMMPfam-Zinc finger, C2H2 type-PF00096,HMMPfam-C2H2-type zinc finger-PF13894,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SMART-zinc finger-SM00355,SUPERFAMILY--SSF57667, at 151,634 to 153,360 9361 mRNA_994: 9362 - K08513 VAMP4 vesicle-associated membrane protein 4, at 154,065 to 154,836 9362
Group Condition mRNA_990 mRNA_991 mRNA_992 mRNA_993 mRNA_994
9358 9359 9360 9361 9362
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 N.D. +0.1 -0.5 -1.2
auxotrophy YNB Glucose 75mM Arginine -2.1 N.D. +0.2 -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -2.6 N.D. +0.2 -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine -1.7 N.D. +0.0 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -2.2 N.D. -0.2 -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 N.D. +0.3 -0.3 -0.4
growth on oleic acid YNB Glucose -1.8 N.D. +0.1 -0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.7 N.D. -0.7 +0.1 +0.6
growth on oleic acid YNB Oleic Acid -1.3 N.D. +0.2 -0.3 -0.3
auxotrophy YNB Glucose -1.5 N.D. +0.4 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 N.D. -0.6 +0.0 +0.1
growth on ricinoleic acid YNB Glucose -1.3 N.D. +0.4 -0.5 -0.1
auxotrophy Dropout Complete -1.1 N.D. +0.4 -0.1 -0.4
growth on ypd YPD -0.5 N.D. -0.3 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.3 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +0.1 +0.1 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.2 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. +0.2 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.0 +0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. -0.2 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.1 +0.1 +0.3
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