Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9360 and 9361 are separated by 1365 nucleotides9361 and 9362 are separated by 704 nucleotides9362 and 9363 are separated by 676 nucleotides9363 and 9364 are separated by 248 nucleotides mRNA_992: 9360 - HMMPfam-OPT oligopeptide transporter protein-PF03169, at 149,516 to 150,268 9360 mRNA_993: 9361 - HMMPfam-Zinc finger, C2H2 type-PF00096,HMMPfam-C2H2-type zinc finger-PF13894,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SMART-zinc finger-SM00355,SUPERFAMILY--SSF57667, at 151,634 to 153,360 9361 mRNA_994: 9362 - K08513 VAMP4 vesicle-associated membrane protein 4, at 154,065 to 154,836 9362 mRNA_995: 9363 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 155,513 to 160,267 9363 mRNA_996: 9364 - K19791 FET3_5 iron transport multicopper oxidase, at 160,516 to 163,771 9364
Group Condition mRNA_992 mRNA_993 mRNA_994 mRNA_995 mRNA_996
9360 9361 9362 9363 9364
growth on oleic acid YNB Glucose +0.1 -0.2 -0.0 -0.4 -5.5
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.4 -0.1 -5.2
auxotrophy YNB Glucose +0.4 -0.1 -0.5 +0.1 -4.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 -1.2 +0.1 -3.4
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.4 +0.0 -4.4
auxotrophy Dropout Complete +0.4 -0.1 -0.4 +0.1 -3.8
growth on ricinoleic acid YNB Glucose +0.4 -0.5 -0.1 -0.0 -3.7
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 +0.3 -0.1 -3.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +0.3 -0.1 -2.9
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.3 -0.4 +0.0 -2.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.1 +0.6 +0.0 -2.4
growth on oleic acid YNB Oleic Acid +0.2 -0.3 -0.3 -0.2 -1.4
growth on ypd YPD -0.3 +0.1 +0.1 +0.0 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.0 +0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 -0.0 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.3 -0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.4 -0.2 +0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.4 -0.3 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 -0.1 -0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 -0.6 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 +0.4 -0.4 +0.2
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