Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9362 and 9363 are separated by 676 nucleotides9363 and 9364 are separated by 248 nucleotides9364 and 9365 are separated by 235 nucleotides9365 and 9366 are separated by 245 nucleotides mRNA_994: 9362 - K08513 VAMP4 vesicle-associated membrane protein 4, at 154,065 to 154,836 9362 mRNA_995: 9363 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 155,513 to 160,267 9363 mRNA_996: 9364 - K19791 FET3_5 iron transport multicopper oxidase, at 160,516 to 163,771 9364 mRNA_997: 9365 - K08735 MSH2 DNA mismatch repair protein MSH2, at 164,007 to 168,056 9365 mRNA_998: 9366 - Hypothetical Protein, at 168,302 to 169,013 9366
Group Condition mRNA_994 mRNA_995 mRNA_996 mRNA_997 mRNA_998
9362 9363 9364 9365 9366
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 -5.2 -0.4 -0.1
growth on oleic acid YNB Glucose -0.0 -0.4 -5.5 -0.2 +0.2
auxotrophy YNB Glucose -0.5 +0.1 -4.9 -0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 +0.1 -3.4 -0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.0 -4.4 -0.3 -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -3.7 -0.4 -0.2
auxotrophy Dropout Complete -0.4 +0.1 -3.8 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 -2.7 -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 -3.2 +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -1.4 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -2.9 +0.1 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 -0.2 +0.0 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.0 -2.4 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.4 -0.3 +0.0 +0.3
growth on ypd YPD +0.1 +0.0 -1.1 +0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.1 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.4 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 -0.4 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.4 +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.4 -0.3 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.4 +0.3 +0.3
remove
mRNA_994
plot
remove
mRNA_995
plot
remove
mRNA_996
remove
mRNA_997
plot
remove
mRNA_998
plot