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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9364 and 9365 are separated by 235 nucleotides
9365 and 9366 are separated by 245 nucleotides
9366 and 9367 are separated by 183 nucleotides
9367 and 9368 are separated by 293 nucleotides
mRNA_996: 9364 - K19791 FET3_5 iron transport multicopper oxidase, at 160,516 to 163,771
9364
mRNA_997: 9365 - K08735 MSH2 DNA mismatch repair protein MSH2, at 164,007 to 168,056
9365
mRNA_998: 9366 - Hypothetical Protein, at 168,302 to 169,013
9366
mRNA_999: 9367 - HMMPfam-PAPA-1-like conserved region-PF04795, at 169,197 to 171,213
9367
mRNA_1000: 9368 - BLAST glycosyltransferase 2 [Moniliophthora roreri MCA ..., at 171,507 to 175,243
9368
Group
Condition
mRNA
_996
mRNA
_997
mRNA
_998
mRNA
_999
mRNA
_1000
9364
9365
9366
9367
9368
auxotrophy
YNB Glucose 75mM Methionine
-5.2
-0.4
-0.1
-0.1
+0.3
growth on oleic acid
YNB Glucose
-5.5
-0.2
+0.2
-0.1
+0.6
auxotrophy
YNB Glucose
-4.9
-0.5
+0.3
-0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-4.4
-0.3
-0.0
+0.1
+0.5
growth on ricinoleic acid
YNB Glucose
-3.7
-0.4
-0.2
-0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.4
+0.0
+0.2
-1.1
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-3.2
+0.1
-0.0
-0.6
+0.2
auxotrophy
Dropout Complete
-3.8
-0.2
+0.1
-0.2
+1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-2.9
+0.1
+1.0
-0.9
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.1
-0.1
-1.0
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.7
-0.3
-0.5
+0.6
+1.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-3.4
-0.4
-0.5
+1.4
+2.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
-0.7
-0.0
growth on ypd
YPD
-1.1
+0.0
+0.4
-0.3
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.0
-1.2
+0.4
+0.5
growth on oleic acid
YNB Oleic Acid
-1.4
-0.0
+0.1
+0.3
+1.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.0
+0.3
-0.2
+0.8
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.3
+0.3
-0.5
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.1
-0.2
+0.4
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.0
+0.3
+1.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.2
+0.1
+0.3
+1.4
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