Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9370 and 9371 are separated by 1102 nucleotides9371 and 9372 are separated by 1022 nucleotides9372 and 9373 are separated by 334 nucleotides9373 and 9374 are separated by 240 nucleotides mRNA_1002: 9370 - KOG3435 Mitochondrial/chloroplast ribosomal protein L54/L37, at 177,946 to 178,405 9370 mRNA_1003: 9371 - HMMPfam-Protein of unknown function (DUF2841)-PF11001, at 179,508 to 182,769 9371 mRNA_1004: 9372 - K02220 CLB1_2 G2/mitotic-specific cyclin 1/2, at 183,792 to 186,232 9372 mRNA_1005: 9373 - K08794 CAMK1 calcium/calmodulin-dependent protein kinase I, at 186,567 to 188,548 9373 mRNA_1006: 9374 - KOG4569 Predicted lipase, at 188,789 to 191,273 9374
Group Condition mRNA_1002 mRNA_1003 mRNA_1004 mRNA_1005 mRNA_1006
9370 9371 9372 9373 9374
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 N.D. -0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 N.D. -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 N.D. -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 N.D. -0.6 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 N.D. -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 N.D. +0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.4 N.D. -0.0 -0.0
growth on ypd YPD N.D. +0.0 N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. +0.0 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.4 N.D. -0.2 +0.3
growth on oleic acid YNB Glucose N.D. +0.3 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.7 N.D. -0.3 +0.1
auxotrophy YNB Glucose N.D. +0.2 N.D. +0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 N.D. +0.3 +0.2
auxotrophy Dropout Complete N.D. +0.3 N.D. +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 N.D. +0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.0 N.D. -0.2 +0.1
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