Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9372 and 9373 are separated by 334 nucleotides
9373 and 9374 are separated by 240 nucleotides
9374 and 9375 are separated by 354 nucleotides
9375 and 9376 are separated by 341 nucleotides
mRNA_1004: 9372 - K02220 CLB1_2 G2/mitotic-specific cyclin 1/2, at 183,792 to 186,232
9372
mRNA_1005: 9373 - K08794 CAMK1 calcium/calmodulin-dependent protein kinase I, at 186,567 to 188,548
9373
mRNA_1006: 9374 - KOG4569 Predicted lipase, at 188,789 to 191,273
9374
mRNA_1007: 9375 - HMMPfam-S1/P1 Nuclease-PF02265,SUPERFAMILY--SSF48537, at 191,628 to 193,033
9375
mRNA_1008: 9376 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 193,375 to 193,873
9376
Group
Condition
mRNA
_1004
mRNA
_1005
mRNA
_1006
mRNA
_1007
mRNA
_1008
9372
9373
9374
9375
9376
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
-0.3
-1.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.6
+0.2
-0.9
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.2
+0.1
-0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
+0.1
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.2
-0.8
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.3
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
-0.0
-0.6
+0.7
growth on ypd
YPD
N.D.
+0.2
+0.1
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
+0.2
-0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.1
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
+0.2
+0.2
-0.3
growth on oleic acid
YNB Glucose
N.D.
+0.0
+0.2
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.0
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
-0.0
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
+0.2
-0.1
+0.1
auxotrophy
Dropout Complete
N.D.
+0.3
+0.2
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.0
+1.0
-0.2
auxotrophy
YNB Glucose
N.D.
+0.4
+0.1
+0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
+0.1
+1.7
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
+0.1
+2.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
+0.0
+1.6
+0.4
remove
mRNA_1004
plot
remove
mRNA_1005
plot
remove
mRNA_1006
remove
mRNA_1007
plot
remove
mRNA_1008
plot