Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9375 and 9376 are separated by 341 nucleotides
9376 and 9377 are separated by 285 nucleotides
9377 and 9378 are separated by 659 nucleotides
9378 and 9379 are separated by 1837 nucleotides
mRNA_1007: 9375 - HMMPfam-S1/P1 Nuclease-PF02265,SUPERFAMILY--SSF48537, at 191,628 to 193,033
9375
mRNA_1008: 9376 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 193,375 to 193,873
9376
mRNA_1009: 9377 - K12659 ARG56 N-acetyl-gamma-glutamyl-phosphate reductase / acetylglutamate kinase, at 194,159 to 197,453
9377
mRNA_1010: 9378 - K16569 TUBGCP2, GCP2 gamma-tubulin complex component 2, at 198,113 to 201,234
9378
mRNA_1011: 9379 - Hypothetical Protein, at 203,072 to 203,287
9379
Group
Condition
mRNA
_1007
mRNA
_1008
mRNA
_1009
mRNA
_1010
mRNA
_1011
9375
9376
9377
9378
9379
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
-4.7
N.D.
-0.6
growth on oleic acid
YNB Glucose
+0.1
-0.2
-4.8
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
-4.0
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
-4.0
N.D.
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.3
-3.9
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.0
-3.5
N.D.
-0.2
auxotrophy
YNB Glucose
+0.6
-0.2
-4.4
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.2
-3.2
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
-3.1
N.D.
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.7
+0.0
-4.5
N.D.
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
-3.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
-0.2
-2.9
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.6
+0.4
-4.0
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+2.1
-0.4
-2.8
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.1
-0.1
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
-0.1
N.D.
-0.8
growth on ypd
YPD
-0.4
-0.1
-0.1
N.D.
-0.0
auxotrophy
Dropout Complete
+0.1
+0.0
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.6
+0.7
-0.3
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.3
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
-0.1
N.D.
+0.0
remove
mRNA_1007
plot
remove
mRNA_1008
plot
remove
mRNA_1009
remove
mRNA_1010
plot
remove
mRNA_1011
plot