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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9378 and 9379 are separated by 1837 nucleotides
9379 and 9380 are separated by 487 nucleotides
9380 and 9381 are separated by 226 nucleotides
9381 and 9382 are separated by 424 nucleotides
mRNA_1010: 9378 - K16569 TUBGCP2, GCP2 gamma-tubulin complex component 2, at 198,113 to 201,234
9378
mRNA_1011: 9379 - Hypothetical Protein, at 203,072 to 203,287
9379
mRNA_1012: 9380 - Hypothetical Protein, at 203,775 to 207,320
9380
mRNA_1013: 9381 - K11761 NPL6, RSC7 chromatin structure-remodeling complex protein RSC7, at 207,547 to 209,466
9381
mRNA_1014: 9382 - Hypothetical Protein, at 209,891 to 213,073
9382
Group
Condition
mRNA
_1010
mRNA
_1011
mRNA
_1012
mRNA
_1013
mRNA
_1014
9378
9379
9380
9381
9382
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.8
-0.5
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.7
-0.3
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.8
-0.3
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
-0.4
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
-0.5
N.D.
+0.3
auxotrophy
YNB Glucose
N.D.
-0.5
-0.3
N.D.
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.3
-0.3
N.D.
+0.0
auxotrophy
Dropout Complete
N.D.
-0.2
-0.5
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.6
-0.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
+0.0
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
+0.1
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-0.0
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.0
+0.2
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
+0.0
N.D.
+0.3
growth on ypd
YPD
N.D.
-0.0
-0.0
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
-0.1
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
+0.1
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.0
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.2
N.D.
+0.2
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