Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9389 and 9390 are separated by 492 nucleotides
9390 and 9391 are separated by 629 nucleotides
9391 and 9392 are separated by 428 nucleotides
9392 and 9393 are separated by 794 nucleotides
mRNA_1021: 9389 - KOG3457 Sec61 protein translocation complex, beta subunit, at 223,629 to 224,377
9389
mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224,870 to 227,887
9390
mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228,517 to 230,203
9391
mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230,632 to 231,986
9392
mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232,781 to 233,762
9393
Group
Condition
mRNA
_1021
mRNA
_1022
mRNA
_1023
mRNA
_1024
mRNA
_1025
9389
9390
9391
9392
9393
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
N.D.
-1.9
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
N.D.
-1.7
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-1.0
N.D.
-0.7
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-1.1
N.D.
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.9
N.D.
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
N.D.
-0.7
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.6
N.D.
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.8
N.D.
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.8
N.D.
-0.2
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.2
N.D.
-0.7
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.8
N.D.
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
N.D.
-0.4
N.D.
auxotrophy
YNB Glucose
N.D.
-0.7
N.D.
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.5
N.D.
-0.2
N.D.
auxotrophy
Dropout Complete
N.D.
-0.5
N.D.
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
N.D.
-0.3
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
N.D.
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
-0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
N.D.
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
+0.5
N.D.
growth on ypd
YPD
N.D.
+0.0
N.D.
+0.4
N.D.
remove
mRNA_1021
plot
remove
mRNA_1022
plot
remove
mRNA_1023
remove
mRNA_1024
plot
remove
mRNA_1025
plot