Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9390 and 9391 are separated by 629 nucleotides9391 and 9392 are separated by 428 nucleotides9392 and 9393 are separated by 794 nucleotides9393 and 9394 are separated by 181 nucleotides mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224,870 to 227,887 9390 mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228,517 to 230,203 9391 mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230,632 to 231,986 9392 mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232,781 to 233,762 9393 mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233,944 to 234,631 9394
Group Condition mRNA_1022 mRNA_1023 mRNA_1024 mRNA_1025 mRNA_1026
9390 9391 9392 9393 9394
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.7 N.D. -2.7
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -1.9 N.D. -0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -1.7 N.D. -0.9
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 N.D. -0.7 N.D. -1.1
growth on oleic acid YNB Oleic Acid -0.6 N.D. -0.4 N.D. -1.0
auxotrophy YNB Glucose 75mM Arginine -1.1 N.D. -0.3 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.8 N.D. -0.1 N.D. -0.8
growth on oleic acid YNB Glucose -0.2 N.D. -0.7 N.D. -0.9
auxotrophy YNB Glucose 75mM Methionine -0.9 N.D. -0.2 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 N.D. -0.2 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. -0.1 N.D. -0.6
auxotrophy YNB Glucose -0.7 N.D. -0.1 N.D. -0.2
auxotrophy Dropout Complete -0.5 N.D. -0.2 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.3 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.4 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 N.D. -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. -0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.4 N.D. +0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.5 N.D. -0.1
growth on ypd YPD +0.0 N.D. +0.4 N.D. +0.0
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