Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9391 and 9392 are separated by 428 nucleotides9392 and 9393 are separated by 794 nucleotides9393 and 9394 are separated by 181 nucleotides9394 and 9395 are separated by 890 nucleotides mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228,517 to 230,203 9391 mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230,632 to 231,986 9392 mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232,781 to 233,762 9393 mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233,944 to 234,631 9394 mRNA_1027: 9395 - Hypothetical Protein, at 235,522 to 235,827 9395
Group Condition mRNA_1023 mRNA_1024 mRNA_1025 mRNA_1026 mRNA_1027
9391 9392 9393 9394 9395
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 N.D. -2.7 -0.8
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.7 N.D. -0.9 -0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.9 N.D. -0.8 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.7 N.D. -1.1 -0.5
growth on oleic acid YNB Glucose N.D. -0.7 N.D. -0.9 -0.4
growth on oleic acid YNB Oleic Acid N.D. -0.4 N.D. -1.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.8 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 N.D. -0.6 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 N.D. -0.6 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 N.D. -0.4 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.3 N.D. -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 N.D. -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 N.D. -0.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 N.D. +0.1 -0.4
auxotrophy YNB Glucose N.D. -0.1 N.D. -0.2 +0.1
auxotrophy Dropout Complete N.D. -0.2 N.D. -0.3 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 N.D. +0.8 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 N.D. -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 N.D. -0.1 +0.2
growth on ypd YPD N.D. +0.4 N.D. +0.0 +1.2
remove
mRNA_1023
plot
remove
mRNA_1024
plot
remove
mRNA_1025
remove
mRNA_1026
plot
remove
mRNA_1027
plot