Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9392 and 9393 are separated by 794 nucleotides9393 and 9394 are separated by 181 nucleotides9394 and 9395 are separated by 890 nucleotides9395 and 9396 are separated by 400 nucleotides mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230,632 to 231,986 9392 mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232,781 to 233,762 9393 mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233,944 to 234,631 9394 mRNA_1027: 9395 - Hypothetical Protein, at 235,522 to 235,827 9395 mRNA_1028: 9396 - HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371, at 236,228 to 240,194 9396
Group Condition mRNA_1024 mRNA_1025 mRNA_1026 mRNA_1027 mRNA_1028
9392 9393 9394 9395 9396
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 N.D. -2.7 -0.8 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.7 N.D. -0.9 -0.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -1.9 N.D. -0.8 -0.3 +0.0
growth on oleic acid YNB Glucose -0.7 N.D. -0.9 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 N.D. -1.1 -0.5 +0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. -1.0 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.8 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.6 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. -0.6 -0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.3 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.4 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.4 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.1 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.5 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 -0.4 +0.2
auxotrophy YNB Glucose -0.1 N.D. -0.2 +0.1 +0.1
auxotrophy Dropout Complete -0.2 N.D. -0.3 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. +0.8 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.0 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. -0.1 +0.2 +0.1
growth on ypd YPD +0.4 N.D. +0.0 +1.2 +0.1
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