Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9393 and 9394 are separated by 181 nucleotides9394 and 9395 are separated by 890 nucleotides9395 and 9396 are separated by 400 nucleotides9396 and 9397 are separated by 37 nucleotides mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232,781 to 233,762 9393 mRNA_1026: 9394 - HMMPfam-Protein of unknown function (DUF3317)-PF11779, at 233,944 to 234,631 9394 mRNA_1027: 9395 - Hypothetical Protein, at 235,522 to 235,827 9395 mRNA_1028: 9396 - HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371, at 236,228 to 240,194 9396 mRNA_1029: 9397 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 240,232 to 241,544 9397
Group Condition mRNA_1025 mRNA_1026 mRNA_1027 mRNA_1028 mRNA_1029
9393 9394 9395 9396 9397
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -2.7 -0.8 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.9 -0.6 -0.3 -0.7
growth on oleic acid YNB Glucose N.D. -0.9 -0.4 -0.1 -0.7
growth on oleic acid YNB Oleic Acid N.D. -1.0 -0.2 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.1 -0.5 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.8 -0.3 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 +0.1 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.4 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.8 -0.2 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 +0.2 -0.2 -0.3
auxotrophy YNB Glucose N.D. -0.2 +0.1 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 +0.3 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.6 -0.0 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.4 +0.2 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.0 -0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.1 +0.0 +0.5
auxotrophy Dropout Complete N.D. -0.3 +0.5 +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.3 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.8 -0.3 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.2 +0.1 +0.3
growth on ypd YPD N.D. +0.0 +1.2 +0.1 -0.2
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