Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9396 and 9397 are separated by 37 nucleotides9397 and 9398 are separated by 411 nucleotides9398 and 9399 are separated by 1076 nucleotides9399 and 9400 are separated by 766 nucleotides mRNA_1028: 9396 - HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371, at 236,228 to 240,194 9396 mRNA_1029: 9397 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 240,232 to 241,544 9397 mRNA_1030: 9398 - Hypothetical Protein, at 241,956 to 242,588 9398 mRNA_1031: 9399 - Hypothetical Protein, at 243,665 to 244,261 9399 mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336 9400
Group Condition mRNA_1028 mRNA_1029 mRNA_1030 mRNA_1031 mRNA_1032
9396 9397 9398 9399 9400
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 +0.3 -0.6 -1.9
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.7 -0.0 -0.6 -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 -0.3 -0.2 -1.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 -0.0 -0.4 -1.0
growth on oleic acid YNB Glucose -0.1 -0.7 -0.1 +0.7 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.4 +0.0 -0.5 +0.6
growth on ypd YPD +0.1 -0.2 +0.2 +0.4 -0.9
growth on ricinoleic acid YNB Glucose -0.0 +0.3 -0.0 +0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.1 +0.6 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.2 +0.5 -0.8
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 +0.1 +0.7 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 -0.2 -0.5 +0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 +0.3 -0.6 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.4 +0.5 +0.1
auxotrophy YNB Glucose +0.1 -0.3 +0.1 +0.8 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.4 -0.1 +0.1 +1.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 -0.1 +1.3 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.5 -0.0 +0.8 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.1 +0.9 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.3 -0.0 +1.4 -0.0
auxotrophy Dropout Complete +0.0 -0.1 +0.1 +1.0 +0.8
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