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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9397 and 9398 are separated by 411 nucleotides
9398 and 9399 are separated by 1076 nucleotides
9399 and 9400 are separated by 766 nucleotides
9400 and 9401 are separated by 103 nucleotides
mRNA_1029: 9397 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 240,232 to 241,544
9397
mRNA_1030: 9398 - Hypothetical Protein, at 241,956 to 242,588
9398
mRNA_1031: 9399 - Hypothetical Protein, at 243,665 to 244,261
9399
mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336
9400
mRNA_1033: 9401 - KOG4653 Uncharacterized conserved protein, at 245,440 to 249,406
9401
Group
Condition
mRNA
_1029
mRNA
_1030
mRNA
_1031
mRNA
_1032
mRNA
_1033
9397
9398
9399
9400
9401
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.3
-0.6
-1.9
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.0
-0.6
-1.2
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
-0.4
-1.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
-0.2
-1.2
+0.7
growth on oleic acid
YNB Glucose
-0.7
-0.1
+0.7
-0.3
-0.7
growth on ypd
YPD
-0.2
+0.2
+0.4
-0.9
-0.6
auxotrophy
YNB Glucose
-0.3
+0.1
+0.8
-0.2
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.4
+0.5
+0.1
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.2
+0.5
-0.8
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.5
+0.9
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.6
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
-0.0
+0.1
-0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.1
+0.7
-1.0
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.0
+1.4
-0.0
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.3
-0.6
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
+0.9
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
+1.3
-0.7
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-0.0
+0.8
-0.6
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.0
-0.5
+0.6
+1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.1
+0.1
+1.3
+0.7
auxotrophy
Dropout Complete
-0.1
+0.1
+1.0
+0.8
-0.2
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