Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9398 and 9399 are separated by 1076 nucleotides9399 and 9400 are separated by 766 nucleotides9400 and 9401 are separated by 103 nucleotides9401 and 9402 are separated by 37 nucleotides mRNA_1030: 9398 - Hypothetical Protein, at 241,956 to 242,588 9398 mRNA_1031: 9399 - Hypothetical Protein, at 243,665 to 244,261 9399 mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336 9400 mRNA_1033: 9401 - KOG4653 Uncharacterized conserved protein, at 245,440 to 249,406 9401 mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249,444 to 250,770 9402
Group Condition mRNA_1030 mRNA_1031 mRNA_1032 mRNA_1033 mRNA_1034
9398 9399 9400 9401 9402
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.6 -1.9 -1.4 -1.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.4 -1.0 -0.0 -1.1
growth on ypd YPD +0.2 +0.4 -0.9 -0.6 -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.6 -1.2 +0.4 +0.1
growth on oleic acid YNB Glucose -0.1 +0.7 -0.3 -0.7 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.6 -0.4 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 +0.9 -0.2 -0.7
growth on ricinoleic acid YNB Glucose -0.0 +0.1 -0.5 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.6 +0.3 +0.2 -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.5 -0.8 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.0 +1.4 -0.0 -1.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +1.3 -0.7 +0.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.8 -0.6 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -1.2 +0.7 +1.0
auxotrophy YNB Glucose +0.1 +0.8 -0.2 -0.8 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.7 -1.0 +0.1 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.5 +0.1 -0.9 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.5 +0.6 +1.2 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.9 -0.1 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +1.3 +0.7 +0.4
auxotrophy Dropout Complete +0.1 +1.0 +0.8 -0.2 +0.8
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