Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9399 and 9400 are separated by 766 nucleotides9400 and 9401 are separated by 103 nucleotides9401 and 9402 are separated by 37 nucleotides9402 and 9403 are separated by 411 nucleotides mRNA_1031: 9399 - Hypothetical Protein, at 243,665 to 244,261 9399 mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336 9400 mRNA_1033: 9401 - KOG4653 Uncharacterized conserved protein, at 245,440 to 249,406 9401 mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249,444 to 250,770 9402 mRNA_1035: 9403 - Hypothetical Protein, at 251,182 to 253,017 9403
Group Condition mRNA_1031 mRNA_1032 mRNA_1033 mRNA_1034 mRNA_1035
9399 9400 9401 9402 9403
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -1.9 -1.4 -1.4 -1.0
growth on ypd YPD +0.4 -0.9 -0.6 -1.3 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -1.0 -0.0 -1.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -1.2 +0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.3 +0.2 -0.7 -0.2
growth on oleic acid YNB Glucose +0.7 -0.3 -0.7 -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 -0.4 -0.1 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.9 -0.2 -0.7 +0.0
growth on ricinoleic acid YNB Glucose +0.1 -0.5 -0.0 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.8 -0.1 +0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.6 +0.1 -0.3 -0.2
growth on oleic acid YNB Oleic Acid +1.4 -0.0 -1.0 -0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +1.3 -0.7 +0.2 -0.7 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.1 -0.9 +0.7 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.7 -1.0 +0.1 +0.6 -0.1
auxotrophy YNB Glucose +0.8 -0.2 -0.8 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -1.2 +0.7 +1.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.9 -0.1 -0.2 +0.4 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.6 +1.2 -0.5 +0.3
auxotrophy Dropout Complete +1.0 +0.8 -0.2 +0.8 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +1.3 +0.7 +0.4 +0.0
remove
mRNA_1031
plot
remove
mRNA_1032
plot
remove
mRNA_1033
remove
mRNA_1034
plot
remove
mRNA_1035
plot