Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9399 and 9400 are separated by 766 nucleotides
9400 and 9401 are separated by 103 nucleotides
9401 and 9402 are separated by 37 nucleotides
9402 and 9403 are separated by 411 nucleotides
mRNA_1031: 9399 - Hypothetical Protein, at 243,665 to 244,261
9399
mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336
9400
mRNA_1033: 9401 - KOG4653 Uncharacterized conserved protein, at 245,440 to 249,406
9401
mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249,444 to 250,770
9402
mRNA_1035: 9403 - Hypothetical Protein, at 251,182 to 253,017
9403
Group
Condition
mRNA
_1031
mRNA
_1032
mRNA
_1033
mRNA
_1034
mRNA
_1035
9399
9400
9401
9402
9403
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-1.9
-1.4
-1.4
-1.0
growth on ypd
YPD
+0.4
-0.9
-0.6
-1.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-1.0
-0.0
-1.1
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-1.2
+0.4
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
+0.3
+0.2
-0.7
-0.2
growth on oleic acid
YNB Glucose
+0.7
-0.3
-0.7
-0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.6
-0.4
-0.1
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.9
-0.2
-0.7
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.5
-0.0
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.5
-0.8
-0.1
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.8
-0.6
+0.1
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+1.4
-0.0
-1.0
-0.4
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.3
-0.7
+0.2
-0.7
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.1
-0.9
+0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.7
-1.0
+0.1
+0.6
-0.1
auxotrophy
YNB Glucose
+0.8
-0.2
-0.8
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-1.2
+0.7
+1.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.9
-0.1
-0.2
+0.4
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.6
+1.2
-0.5
+0.3
auxotrophy
Dropout Complete
+1.0
+0.8
-0.2
+0.8
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+1.3
+0.7
+0.4
+0.0
remove
mRNA_1031
plot
remove
mRNA_1032
plot
remove
mRNA_1033
remove
mRNA_1034
plot
remove
mRNA_1035
plot