Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9400 and 9401 are separated by 103 nucleotides9401 and 9402 are separated by 37 nucleotides9402 and 9403 are separated by 411 nucleotides9403 and 9404 are separated by 152 nucleotides mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336 9400 mRNA_1033: 9401 - KOG4653 Uncharacterized conserved protein, at 245,440 to 249,406 9401 mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249,444 to 250,770 9402 mRNA_1035: 9403 - Hypothetical Protein, at 251,182 to 253,017 9403 mRNA_1036: 9404 - K12590 RRP46, EXOSC5 exosome complex component RRP46, at 253,170 to 254,250 9404
Group Condition mRNA_1032 mRNA_1033 mRNA_1034 mRNA_1035 mRNA_1036
9400 9401 9402 9403 9404
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 -1.4 -1.4 -1.0 N.D.
growth on ypd YPD -0.9 -0.6 -1.3 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.0 -1.1 +0.5 N.D.
growth on oleic acid YNB Glucose -0.3 -0.7 -0.5 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -1.0 -0.4 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.7 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.2 -0.7 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.8 -0.1 +0.0 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.1 -0.3 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.2 +0.4 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.5 -0.0 -0.1 -0.0 N.D.
auxotrophy YNB Glucose -0.2 -0.8 +0.3 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -1.0 +0.1 +0.6 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 -0.7 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.9 +0.7 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.2 -0.7 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 +0.7 +1.0 +0.1 N.D.
auxotrophy Dropout Complete +0.8 -0.2 +0.8 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +1.2 -0.5 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.3 +0.7 +0.4 +0.0 N.D.
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