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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9400 and 9401 are separated by 103 nucleotides
9401 and 9402 are separated by 37 nucleotides
9402 and 9403 are separated by 411 nucleotides
9403 and 9404 are separated by 152 nucleotides
mRNA_1032: 9400 - Hypothetical Protein, at 245,028 to 245,336
9400
mRNA_1033: 9401 - KOG4653 Uncharacterized conserved protein, at 245,440 to 249,406
9401
mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249,444 to 250,770
9402
mRNA_1035: 9403 - Hypothetical Protein, at 251,182 to 253,017
9403
mRNA_1036: 9404 - K12590 RRP46, EXOSC5 exosome complex component RRP46, at 253,170 to 254,250
9404
Group
Condition
mRNA
_1032
mRNA
_1033
mRNA
_1034
mRNA
_1035
mRNA
_1036
9400
9401
9402
9403
9404
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
-1.4
-1.4
-1.0
N.D.
growth on ypd
YPD
-0.9
-0.6
-1.3
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.0
-1.1
+0.5
N.D.
growth on oleic acid
YNB Glucose
-0.3
-0.7
-0.5
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
-1.0
-0.4
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.1
-0.7
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
+0.2
-0.7
-0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.8
-0.1
+0.0
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.1
-0.3
-0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
+0.4
+0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.5
-0.0
-0.1
-0.0
N.D.
auxotrophy
YNB Glucose
-0.2
-0.8
+0.3
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-1.0
+0.1
+0.6
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.2
-0.7
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.9
+0.7
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.9
-0.2
-0.7
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
+0.4
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.2
+0.7
+1.0
+0.1
N.D.
auxotrophy
Dropout Complete
+0.8
-0.2
+0.8
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
+1.2
-0.5
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.3
+0.7
+0.4
+0.0
N.D.
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