Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9402 and 9403 are separated by 411 nucleotides9403 and 9404 are separated by 152 nucleotides9404 and 9405 are separated by 113 nucleotides9405 and 9406 are separated by 583 nucleotides mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249,444 to 250,770 9402 mRNA_1035: 9403 - Hypothetical Protein, at 251,182 to 253,017 9403 mRNA_1036: 9404 - K12590 RRP46, EXOSC5 exosome complex component RRP46, at 253,170 to 254,250 9404 mRNA_1037: 9405 - K12160 SUMO, SMT3 small ubiquitin-related modifier, at 254,364 to 255,172 9405 mRNA_1038: 9406 - HMMPfam-Protein of unknown function (DUF2034)-PF10356, at 255,756 to 256,586 9406
Group Condition mRNA_1034 mRNA_1035 mRNA_1036 mRNA_1037 mRNA_1038
9402 9403 9404 9405 9406
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -1.0 N.D. N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.3 N.D. N.D. -1.8
growth on ypd YPD -1.3 +0.3 N.D. N.D. +0.1
growth on oleic acid YNB Glucose -0.5 -0.1 N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.4 +0.0 N.D. N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.1 +0.5 N.D. N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.0 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 N.D. N.D. -0.1
auxotrophy Dropout Complete +0.8 -0.1 N.D. N.D. -1.0
auxotrophy YNB Glucose +0.3 +0.1 N.D. N.D. -0.7
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.1 N.D. N.D. +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.0 N.D. N.D. +0.6
growth on ricinoleic acid YNB Glucose -0.1 -0.0 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 N.D. N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.0 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.6 -0.1 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.7 -0.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 +0.1 N.D. N.D. +0.0
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