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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9407 and 9408 are separated by 160 nucleotides
9408 and 9409 are separated by 470 nucleotides
9409 and 9410 are separated by 120 nucleotides
9410 and 9411 are separated by 160 nucleotides
mRNA_1039: 9407 - K18723 GLE1 nucleoporin GLE1, at 256,702 to 258,919
9407
mRNA_1040: 9408 - HMMPfam-NADH(P)-binding-PF13460,SUPERFAMILY--SSF51735, at 259,080 to 260,427
9408
mRNA_1041: 9409 - K08504 BET1 blocked early in transport 1, at 260,898 to 261,462
9409
mRNA_1042: 9410 - Hypothetical Protein, at 261,583 to 262,732
9410
mRNA_1043: 9411 - K16732 PRC1 protein regulator of cytokinesis 1, at 262,893 to 265,321
9411
Group
Condition
mRNA
_1039
mRNA
_1040
mRNA
_1041
mRNA
_1042
mRNA
_1043
9407
9408
9409
9410
9411
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.9
-0.3
+0.3
growth on oleic acid
YNB Glucose
N.D.
-0.2
-0.5
-0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+0.0
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.5
+0.1
+0.0
-0.1
growth on ypd
YPD
N.D.
-0.2
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
-0.5
-0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.3
-0.2
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
+0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
+0.3
-0.1
-0.1
auxotrophy
YNB Glucose
N.D.
-0.1
-0.1
+0.0
+0.1
auxotrophy
Dropout Complete
N.D.
-0.3
+0.3
+0.0
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
+0.2
+0.0
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
-0.0
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.5
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+0.1
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
-0.1
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
+0.3
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
+0.1
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
+0.4
-0.1
+0.2
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