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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9409 and 9410 are separated by 120 nucleotides
9410 and 9411 are separated by 160 nucleotides
9411 and 9412 are separated by 1288 nucleotides
9412 and 9413 are separated by 539 nucleotides
mRNA_1041: 9409 - K08504 BET1 blocked early in transport 1, at 260,898 to 261,462
9409
mRNA_1042: 9410 - Hypothetical Protein, at 261,583 to 262,732
9410
mRNA_1043: 9411 - K16732 PRC1 protein regulator of cytokinesis 1, at 262,893 to 265,321
9411
mRNA_1044: 9412 - K07765 MBTPS2 S2P endopeptidase, at 266,610 to 267,641
9412
mRNA_1045: 9413 - Hypothetical Protein, at 268,181 to 268,879
9413
Group
Condition
mRNA
_1041
mRNA
_1042
mRNA
_1043
mRNA
_1044
mRNA
_1045
9409
9410
9411
9412
9413
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.3
+0.3
-0.5
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.1
-0.0
-0.6
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.1
+0.4
-0.4
N.D.
growth on oleic acid
YNB Glucose
-0.5
-0.1
+0.0
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.2
-0.0
-0.3
N.D.
growth on ypd
YPD
-0.1
-0.1
-0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.1
-0.2
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.2
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.0
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.1
+0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
-0.2
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
-0.1
+0.4
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.0
-0.1
+0.4
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.0
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
+0.1
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.1
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.1
-0.3
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.2
+0.0
+0.7
N.D.
auxotrophy
YNB Glucose
-0.1
+0.0
+0.1
+0.7
N.D.
auxotrophy
Dropout Complete
+0.3
+0.0
-0.1
+0.5
N.D.
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