Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9415 and 9416 are separated by 184 nucleotides9416 and 9417 are separated by 76 nucleotides9417 and 9418 are separated by 278 nucleotides9418 and 9419 are separated by 84 nucleotides mRNA_1047: 9415 - K19054 FXN frataxin, at 272,188 to 272,699 9415 mRNA_1048: 9416 - KOG1812 Predicted E3 ubiquitin ligase, at 272,884 to 273,999 9416 mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274,076 to 276,723 9417 mRNA_1050: 9418 - Hypothetical Protein, at 277,002 to 277,499 9418 mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277,584 to 281,665 9419
Group Condition mRNA_1047 mRNA_1048 mRNA_1049 mRNA_1050 mRNA_1051
9415 9416 9417 9418 9419
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.4 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.1 -0.3 -0.1
growth on ypd YPD N.D. -0.1 +0.0 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 -0.6 +0.2
auxotrophy Dropout Complete N.D. -0.1 +0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.2 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.2 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.4 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.1 +0.1 +0.2
growth on oleic acid YNB Glucose N.D. +0.0 +0.0 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 -0.1 +0.1 -0.0
auxotrophy YNB Glucose N.D. +0.0 +0.3 -0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.1 +0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.3 +0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.0 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 +0.2 -0.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 -0.0 +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.1 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 +0.4 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.7 +0.5 -0.2 +0.1
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