Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9416 and 9417 are separated by 76 nucleotides
9417 and 9418 are separated by 278 nucleotides
9418 and 9419 are separated by 84 nucleotides
9419 and 9420 are separated by 364 nucleotides
mRNA_1048: 9416 - KOG1812 Predicted E3 ubiquitin ligase, at 272,884 to 273,999
9416
mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274,076 to 276,723
9417
mRNA_1050: 9418 - Hypothetical Protein, at 277,002 to 277,499
9418
mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277,584 to 281,665
9419
mRNA_1052: 9420 - K10896 FANCM fanconi anemia group M protein, at 282,030 to 286,830
9420
Group
Condition
mRNA
_1048
mRNA
_1049
mRNA
_1050
mRNA
_1051
mRNA
_1052
9416
9417
9418
9419
9420
growth on oleic acid
YNB Oleic Acid
+0.0
-0.4
-0.2
-0.1
-0.2
growth on ypd
YPD
-0.1
+0.0
-0.2
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.2
-0.6
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
-0.3
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.2
+0.2
-0.2
-0.2
auxotrophy
Dropout Complete
-0.1
+0.3
-0.2
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.4
-0.2
-0.0
-0.0
growth on oleic acid
YNB Glucose
+0.0
+0.0
+0.3
-0.2
-0.2
auxotrophy
YNB Glucose
+0.0
+0.3
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.0
+0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
+0.4
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
+0.1
+0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.3
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.2
-0.4
+0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.1
+0.1
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.0
+0.4
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.1
+0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.5
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.3
+0.3
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.5
-0.2
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.4
-0.1
+0.2
+0.2
remove
mRNA_1048
plot
remove
mRNA_1049
plot
remove
mRNA_1050
remove
mRNA_1051
plot
remove
mRNA_1052
plot