Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9427 and 9428 are separated by 243 nucleotides9428 and 9429 are separated by 734 nucleotides9429 and 9430 are separated by 94 nucleotides9430 and 9431 are separated by 622 nucleotides mRNA_1059: 9427 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 300,871 to 301,562 9427 mRNA_1060: 9428 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 301,806 to 307,768 9428 mRNA_1061: 9429 - BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-..., at 308,503 to 311,284 9429 mRNA_1062: 9430 - K10742 DNA2 DNA replication ATP-dependent helicase Dna2, at 311,379 to 314,968 9430 mRNA_1063: 9431 - BLAST DNA replication ATP-dependent helicase Dna2 [Rhod..., at 315,591 to 316,093 9431
Group Condition mRNA_1059 mRNA_1060 mRNA_1061 mRNA_1062 mRNA_1063
9427 9428 9429 9430 9431
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.4 -1.0 -0.5 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.4 -0.3 -0.1 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 -0.2 -0.2 -0.9
growth on oleic acid YNB Oleic Acid -0.5 +0.1 -0.2 -0.1 -0.6
auxotrophy Dropout Complete -0.7 +0.3 +0.2 -0.2 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.3 -0.0 -0.1 -0.8
growth on oleic acid YNB Glucose -0.5 -0.0 -0.5 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 -0.8 -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.0 -0.3 -0.2 -0.5
growth on ricinoleic acid YNB Glucose -0.4 +0.2 +0.0 -0.1 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 -0.1 -0.0 -0.9
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.0 -0.5 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 -0.2 -0.1 -0.2
auxotrophy YNB Glucose -0.4 +0.4 +0.1 -0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.0 -0.3 +0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.3 +0.2 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 -0.3 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 -0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.0 -0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 -0.4 -0.2 +0.1
growth on ypd YPD +0.1 +0.1 -0.0 -0.3 +0.3
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