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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9428 and 9429 are separated by 734 nucleotides
9429 and 9430 are separated by 94 nucleotides
9430 and 9431 are separated by 622 nucleotides
9431 and 9432 are separated by 412 nucleotides
mRNA_1060: 9428 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 301,806 to 307,768
9428
mRNA_1061: 9429 - BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-..., at 308,503 to 311,284
9429
mRNA_1062: 9430 - K10742 DNA2 DNA replication ATP-dependent helicase Dna2, at 311,379 to 314,968
9430
mRNA_1063: 9431 - BLAST DNA replication ATP-dependent helicase Dna2 [Rhod..., at 315,591 to 316,093
9431
mRNA_1064: 9432 - K05533 ANP1 mannan polymerase II complex ANP1 subunit, at 316,506 to 317,869
9432
Group
Condition
mRNA
_1060
mRNA
_1061
mRNA
_1062
mRNA
_1063
mRNA
_1064
9428
9429
9430
9431
9432
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.0
-0.5
-0.6
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
-0.2
+0.2
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.2
-0.9
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.8
-0.3
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.3
-0.2
-0.5
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.0
-0.1
-0.8
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.4
-0.2
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.0
-0.5
+0.1
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
-0.1
-0.6
+0.3
auxotrophy
Dropout Complete
+0.3
+0.2
-0.2
-0.7
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.0
-0.1
-0.7
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.5
-0.1
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.3
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.0
+0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.3
+0.2
-0.4
+0.4
auxotrophy
YNB Glucose
+0.4
+0.1
-0.1
-0.6
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
-0.1
-0.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.3
-0.1
-1.0
+1.0
growth on ypd
YPD
+0.1
-0.0
-0.3
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.2
-0.0
-0.5
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
-0.0
-0.9
+1.0
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