Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9440 and 9441 are separated by 784 nucleotides9441 and 9442 are separated by 765 nucleotides9442 and 9443 are separated by 184 nucleotides9443 and 9444 are separated by 248 nucleotides mRNA_1072: 9440 - Hypothetical Protein, at 341,677 to 343,060 9440 mRNA_1073: 9441 - Hypothetical Protein, at 343,845 to 345,302 9441 mRNA_1074: 9442 - HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SUPERFAMILY--SSF48403, at 346,068 to 346,985 9442 mRNA_1075: 9443 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 347,170 to 348,411 9443 mRNA_1076: 9444 - K02324 POLE1 DNA polymerase epsilon subunit 1, at 348,660 to 356,355 9444
Group Condition mRNA_1072 mRNA_1073 mRNA_1074 mRNA_1075 mRNA_1076
9440 9441 9442 9443 9444
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.6 -0.0 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.4 -0.2 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.5 -0.3 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.1 -0.3 N.D.
growth on ypd YPD -0.4 +0.4 -0.5 -0.1 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 -0.4 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 +0.0 +0.0 N.D.
auxotrophy Dropout Complete +0.6 -1.0 -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.6 +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 +0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.4 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.4 -1.1 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.3 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.5 +0.2 -0.2 N.D.
auxotrophy YNB Glucose +0.4 -0.6 +0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.2 -0.7 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.7 +0.6 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.0 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.5 +0.3 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.5 +0.1 N.D.
remove
mRNA_1072
plot
remove
mRNA_1073
plot
remove
mRNA_1074
remove
mRNA_1075
plot
remove
mRNA_1076
plot