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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9441 and 9442 are separated by 765 nucleotides
9442 and 9443 are separated by 184 nucleotides
9443 and 9444 are separated by 248 nucleotides
9444 and 9445 are separated by 395 nucleotides
mRNA_1073: 9441 - Hypothetical Protein, at 343,845 to 345,302
9441
mRNA_1074: 9442 - HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SUPERFAMILY--SSF48403, at 346,068 to 346,985
9442
mRNA_1075: 9443 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 347,170 to 348,411
9443
mRNA_1076: 9444 - K02324 POLE1 DNA polymerase epsilon subunit 1, at 348,660 to 356,355
9444
mRNA_1077: 9445 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 356,751 to 359,055
9445
Group
Condition
mRNA
_1073
mRNA
_1074
mRNA
_1075
mRNA
_1076
mRNA
_1077
9441
9442
9443
9444
9445
auxotrophy
Dropout Complete
-1.0
-0.1
+0.1
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.1
-0.3
N.D.
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.3
+0.0
N.D.
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.4
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.0
-0.1
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.2
-0.2
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-1.1
+0.3
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
+0.1
-0.3
-0.0
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.6
+0.0
+0.0
N.D.
-0.1
auxotrophy
YNB Glucose
-0.6
+0.2
+0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.4
-0.1
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
+0.2
-0.7
+0.4
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
+0.0
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.0
+0.0
N.D.
+0.1
growth on ypd
YPD
+0.4
-0.5
-0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
+0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.6
+0.3
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.5
+0.1
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
+0.4
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.3
+0.4
N.D.
-0.2
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