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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9451 and 9452 are separated by 1667 nucleotides
9452 and 9453 are separated by 516 nucleotides
9453 and 9454 are separated by 53 nucleotides
9454 and 9455 are separated by 402 nucleotides
mRNA_1083: 9451 - Hypothetical Protein, at 369,201 to 370,313
9451
mRNA_1084: 9452 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 371,981 to 373,255
9452
mRNA_1085: 9453 - Hypothetical Protein, at 373,772 to 374,332
9453
mRNA_1086: 9454 - Hypothetical Protein, at 374,386 to 377,567
9454
mRNA_1087: 9455 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 377,970 to 379,646
9455
Group
Condition
mRNA
_1083
mRNA
_1084
mRNA
_1085
mRNA
_1086
mRNA
_1087
9451
9452
9453
9454
9455
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
-0.7
-0.5
-0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.8
-0.8
-0.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.4
-0.0
-0.7
-0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.4
+0.5
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.7
-0.2
-0.4
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.2
-0.4
-0.3
growth on oleic acid
YNB Oleic Acid
-0.3
-0.2
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.4
+0.2
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
-0.2
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.6
+0.0
-0.3
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
-0.2
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.0
-0.1
-0.2
+0.3
auxotrophy
Dropout Complete
+0.7
-0.4
-0.2
-0.4
-0.0
auxotrophy
YNB Glucose
+1.0
-0.1
-0.6
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
-0.2
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+1.1
-0.4
-0.3
-0.2
-0.3
growth on oleic acid
YNB Glucose
+0.8
-0.2
-0.4
-0.1
-0.1
growth on ypd
YPD
-0.0
-0.1
-0.1
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
+0.5
-0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.5
+0.3
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
+1.0
-0.1
+0.1
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