Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9455 and 9456 are separated by 482 nucleotides
9456 and 9457 are separated by 159 nucleotides
9457 and 9458 are separated by 288 nucleotides
9458 and 9459 are separated by 370 nucleotides
mRNA_1087: 9455 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 377,970 to 379,646
9455
mRNA_1088: 9456 - KOG3179 Predicted glutamine synthetase, at 380,129 to 381,362
9456
mRNA_1089: 9457 - K01638 aceB, glcB malate synthase, at 381,522 to 383,960
9457
mRNA_1090: 9458 - K12393 AP1M AP-1 complex subunit mu, at 384,249 to 386,320
9458
mRNA_1091: 9459 - Hypothetical Protein, at 386,691 to 388,371
9459
Group
Condition
mRNA
_1087
mRNA
_1088
mRNA
_1089
mRNA
_1090
mRNA
_1091
9455
9456
9457
9458
9459
growth on oleic acid
YNB Oleic Acid
-0.2
-0.5
-2.9
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.4
-3.0
N.D.
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.3
-2.6
N.D.
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.0
-0.2
N.D.
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.0
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.4
+0.1
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
+0.2
N.D.
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.4
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.4
-0.2
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.2
-0.2
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
-0.1
N.D.
+0.0
growth on ypd
YPD
+0.3
+0.2
-0.2
N.D.
+0.1
auxotrophy
YNB Glucose
-0.2
+0.3
-0.1
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.3
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
+0.0
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.1
+0.4
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.7
-0.0
N.D.
-0.4
auxotrophy
Dropout Complete
-0.0
+0.5
-0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.4
+0.0
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.7
+0.2
N.D.
+0.4
remove
mRNA_1087
plot
remove
mRNA_1088
plot
remove
mRNA_1089
remove
mRNA_1090
plot
remove
mRNA_1091
plot