Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9456 and 9457 are separated by 159 nucleotides9457 and 9458 are separated by 288 nucleotides9458 and 9459 are separated by 370 nucleotides9459 and 9460 are separated by 119 nucleotides mRNA_1088: 9456 - KOG3179 Predicted glutamine synthetase, at 380,129 to 381,362 9456 mRNA_1089: 9457 - K01638 aceB, glcB malate synthase, at 381,522 to 383,960 9457 mRNA_1090: 9458 - K12393 AP1M AP-1 complex subunit mu, at 384,249 to 386,320 9458 mRNA_1091: 9459 - Hypothetical Protein, at 386,691 to 388,371 9459 mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388,491 to 389,761 9460
Group Condition mRNA_1088 mRNA_1089 mRNA_1090 mRNA_1091 mRNA_1092
9456 9457 9458 9459 9460
growth on oleic acid YNB Oleic Acid -0.5 -2.9 N.D. +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -3.0 N.D. +0.4 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -2.6 N.D. +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 N.D. -0.3 -0.1
growth on oleic acid YNB Glucose +0.1 -0.4 N.D. +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 N.D. +0.4 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 N.D. +0.0 -0.1
growth on ypd YPD +0.2 -0.2 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 N.D. -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.2 N.D. -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.0 N.D. -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.2 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.3 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 N.D. +0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -0.0 N.D. -0.4 +0.1
auxotrophy YNB Glucose +0.3 -0.1 N.D. +0.4 +0.0
auxotrophy Dropout Complete +0.5 -0.1 N.D. +0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.0 N.D. +0.5 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.2 N.D. +0.4 -0.1
remove
mRNA_1088
plot
remove
mRNA_1089
plot
remove
mRNA_1090
remove
mRNA_1091
plot
remove
mRNA_1092
plot