Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9457 and 9458 are separated by 288 nucleotides9458 and 9459 are separated by 370 nucleotides9459 and 9460 are separated by 119 nucleotides9460 and 9461 are separated by 70 nucleotides mRNA_1089: 9457 - K01638 aceB, glcB malate synthase, at 381,522 to 383,960 9457 mRNA_1090: 9458 - K12393 AP1M AP-1 complex subunit mu, at 384,249 to 386,320 9458 mRNA_1091: 9459 - Hypothetical Protein, at 386,691 to 388,371 9459 mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388,491 to 389,761 9460 mRNA_1093: 9461 - K08734 MLH1 DNA mismatch repair protein MLH1, at 389,832 to 392,680 9461
Group Condition mRNA_1089 mRNA_1090 mRNA_1091 mRNA_1092 mRNA_1093
9457 9458 9459 9460 9461
growth on oleic acid YNB Oleic Acid -2.9 N.D. +0.2 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -3.0 N.D. +0.4 +0.4 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -2.6 N.D. +0.3 +0.2 +0.0
growth on oleic acid YNB Glucose -0.4 N.D. +0.1 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.4 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.3 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. -0.1 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.4 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.1 -0.1 -0.1
growth on ypd YPD -0.2 N.D. +0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. -0.2 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.4 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.1 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.1 +0.0 -0.0
auxotrophy Dropout Complete -0.1 N.D. +0.2 -0.0 +0.1
auxotrophy YNB Glucose -0.1 N.D. +0.4 +0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.2 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.4 -0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.5 +0.3 +0.0
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