Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9458 and 9459 are separated by 370 nucleotides
9459 and 9460 are separated by 119 nucleotides
9460 and 9461 are separated by 70 nucleotides
9461 and 9462 are separated by 1037 nucleotides
mRNA_1090: 9458 - K12393 AP1M AP-1 complex subunit mu, at 384,249 to 386,320
9458
mRNA_1091: 9459 - Hypothetical Protein, at 386,691 to 388,371
9459
mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388,491 to 389,761
9460
mRNA_1093: 9461 - K08734 MLH1 DNA mismatch repair protein MLH1, at 389,832 to 392,680
9461
mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393,718 to 395,326
9462
Group
Condition
mRNA
_1090
mRNA
_1091
mRNA
_1092
mRNA
_1093
mRNA
_1094
9458
9459
9460
9461
9462
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
+0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.3
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.0
-0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
-0.5
+0.0
-0.5
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
-0.2
-0.2
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.3
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
-0.2
-0.2
growth on ypd
YPD
N.D.
+0.1
-0.1
+0.0
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
-0.1
-0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
-0.1
+0.2
auxotrophy
Dropout Complete
N.D.
+0.2
-0.0
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.0
-0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.4
+0.4
-0.0
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
-0.1
-0.2
+0.2
auxotrophy
YNB Glucose
N.D.
+0.4
+0.0
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
+0.2
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
+0.2
+0.0
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.5
+0.3
+0.0
-0.3
remove
mRNA_1090
plot
remove
mRNA_1091
plot
remove
mRNA_1092
remove
mRNA_1093
plot
remove
mRNA_1094
plot