Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9460 and 9461 are separated by 70 nucleotides9461 and 9462 are separated by 1037 nucleotides9462 and 9463 are separated by 489 nucleotides9463 and 9464 are separated by 80 nucleotides mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388,491 to 389,761 9460 mRNA_1093: 9461 - K08734 MLH1 DNA mismatch repair protein MLH1, at 389,832 to 392,680 9461 mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393,718 to 395,326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395,816 to 397,150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397,231 to 398,090 9464
Group Condition mRNA_1092 mRNA_1093 mRNA_1094 mRNA_1095 mRNA_1096
9460 9461 9462 9463 9464
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.1 -0.7 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.2 -0.4 +0.0 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.3 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.0 -0.3 -0.3 -0.3
growth on oleic acid YNB Glucose -0.3 -0.2 -0.2 +0.7 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.2 -0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.0 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.2 +0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -0.5 +0.6 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.0 -0.5 -0.0 +0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 +0.2 -0.7 +0.7
auxotrophy Dropout Complete -0.0 +0.1 -0.1 +0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 +0.2 -0.2 -0.2
growth on ypd YPD -0.1 +0.0 -0.2 +0.5 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.0 -0.6 +0.2 +0.5
growth on ricinoleic acid YNB Glucose +0.3 +0.0 -0.3 +0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 +0.6 +0.4
auxotrophy YNB Glucose +0.0 -0.0 -0.0 +0.6 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 -0.1 +0.5 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 +0.2 +0.3 +0.9
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.2 +0.8 +1.0
remove
mRNA_1092
plot
remove
mRNA_1093
plot
remove
mRNA_1094
remove
mRNA_1095
plot
remove
mRNA_1096
plot