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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9463 and 9464 are separated by 80 nucleotides
9464 and 9465 are separated by 1053 nucleotides
9465 and 9466 are separated by 447 nucleotides
9466 and 9467 are separated by 361 nucleotides
mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395,816 to 397,150
9463
mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397,231 to 398,090
9464
mRNA_1097: 9465 - Hypothetical Protein, at 399,144 to 399,987
9465
mRNA_1098: 9466 - Hypothetical Protein, at 400,435 to 400,998
9466
mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401,360 to 402,298
9467
Group
Condition
mRNA
_1095
mRNA
_1096
mRNA
_1097
mRNA
_1098
mRNA
_1099
9463
9464
9465
9466
9467
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-1.0
-0.3
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.2
-0.7
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.9
+0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
+0.2
+0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
+0.7
-0.5
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.8
-0.4
-0.5
-0.1
growth on oleic acid
YNB Glucose
+0.7
-1.1
-0.1
+0.6
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.3
+0.1
+0.5
+0.3
growth on oleic acid
YNB Oleic Acid
+0.2
-0.2
-0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
+0.1
+0.2
+0.2
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.5
-0.0
+0.4
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
+0.1
+0.4
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.9
-0.2
-0.5
+0.2
growth on ypd
YPD
+0.5
+0.3
-0.4
-0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.4
-0.2
-0.1
+0.1
auxotrophy
Dropout Complete
+0.5
-0.3
+0.3
+0.1
+0.5
growth on ricinoleic acid
YNB Glucose
+0.1
+0.4
-0.5
+0.7
+0.6
auxotrophy
YNB Glucose
+0.6
+0.3
+0.1
+0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.6
-0.3
+0.5
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
+0.0
+0.4
+0.8
ypd buoyancy
40 hrs Low Buoyancy
+0.8
+1.0
-0.2
-0.4
+0.9
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