Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9465 and 9466 are separated by 447 nucleotides9466 and 9467 are separated by 361 nucleotides9467 and 9468 are separated by 286 nucleotides9468 and 9469 are separated by 269 nucleotides mRNA_1097: 9465 - Hypothetical Protein, at 399,144 to 399,987 9465 mRNA_1098: 9466 - Hypothetical Protein, at 400,435 to 400,998 9466 mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401,360 to 402,298 9467 mRNA_1100: 9468 - K14679 TRL1 tRNA ligase, at 402,585 to 405,523 9468 mRNA_1101: 9469 - KOG1206 Peroxisomal multifunctional beta-oxidation protein and related enzymes, at 405,793 to 407,272 9469
Group Condition mRNA_1097 mRNA_1098 mRNA_1099 mRNA_1100 mRNA_1101
9465 9466 9467 9468 9469
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.1 -0.2 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 -0.4 N.D. -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.5 -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.2 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.5 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 +0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 +0.1 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.4 -0.0 N.D. -0.4
growth on oleic acid YNB Glucose -0.1 +0.6 -0.1 N.D. -0.3
growth on ypd YPD -0.4 -0.1 +0.5 N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 +0.5 N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 +0.9 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 +0.4 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.5 +0.7 +0.6 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.5 +0.3 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.5 +0.5 N.D. +0.1
auxotrophy Dropout Complete +0.3 +0.1 +0.5 N.D. -0.1
auxotrophy YNB Glucose +0.1 +0.4 +0.3 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.4 +0.8 N.D. -0.1
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