Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9475 and 9476 are separated by 272 nucleotides9476 and 9477 are separated by 205 nucleotides9477 and 9478 are separated by 621 nucleotides9478 and 9479 are separated by 232 nucleotides mRNA_1107: 9475 - KOG0123 Polyadenylate-binding protein (RRM superfamily), at 421,636 to 422,494 9475 mRNA_1108: 9476 - KOG1134 Uncharacterized conserved protein, at 422,767 to 426,748 9476 mRNA_1109: 9477 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 426,954 to 427,895 9477 mRNA_1110: 9478 - Hypothetical Protein, at 428,517 to 429,913 9478 mRNA_1111: 9479 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 430,146 to 432,940 9479
Group Condition mRNA_1107 mRNA_1108 mRNA_1109 mRNA_1110 mRNA_1111
9475 9476 9477 9478 9479
auxotrophy Dropout Complete N.D. -0.9 -0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.7 -0.3 -0.2 -0.2
growth on ricinoleic acid YNB Glucose N.D. -1.0 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.8 -0.2 -0.1 -0.2
growth on ypd YPD N.D. -0.6 +0.3 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.9 -0.2 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.7 -0.3 +0.2 -0.1
growth on oleic acid YNB Glucose N.D. -0.8 +0.1 -0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.9 -0.4 +0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.7 +0.0 -0.1 +0.0
auxotrophy YNB Glucose N.D. -0.6 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.1 +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.7 -0.1 +0.6 -0.4
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 -0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.1 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 +0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.0 +0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.2 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.3 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 -0.0 +0.3 +0.1
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